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Cluster: HRGMv2_2258_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2258_6 HRGMv2_2258_6_48 53067 55679 - GT51
pfam HRGMv2_2258_6 HRGMv2_2258_6_49 55927 56559 + Mntp
TC HRGMv2_2258_6 HRGMv2_2258_6_50 56588 59251 - 3.A.3.2.21
pfam HRGMv2_2258_6 HRGMv2_2258_6_51 59420 60346 - CbiK
TC HRGMv2_2258_6 HRGMv2_2258_6_52 60875 62572 - 3.A.1.5.22
TC HRGMv2_2258_6 HRGMv2_2258_6_53 63005 64729 - 3.A.1.5.22
TC HRGMv2_2258_6 HRGMv2_2258_6_54 64922 65983 - 3.A.1.5.20
TC HRGMv2_2258_6 HRGMv2_2258_6_55 65983 66987 - 3.A.1.5.2
TC HRGMv2_2258_6 HRGMv2_2258_6_56 67001 68041 - 3.A.1.5.2
TC HRGMv2_2258_6 HRGMv2_2258_6_57 68055 68972 - 3.A.1.5.2
Gene ID: HRGMv2_2258_6_48
Type: CAZyme
Location: 53067 - 55679 (-)
Gene ID: HRGMv2_2258_6_49
Type: pfam
Location: 55927 - 56559 (+)
Gene ID: HRGMv2_2258_6_50
Type: TC
Location: 56588 - 59251 (-)
Gene ID: HRGMv2_2258_6_51
Type: pfam
Location: 59420 - 60346 (-)
Gene ID: HRGMv2_2258_6_52
Type: TC
Location: 60875 - 62572 (-)
Gene ID: HRGMv2_2258_6_53
Type: TC
Location: 63005 - 64729 (-)
Gene ID: HRGMv2_2258_6_54
Type: TC
Location: 64922 - 65983 (-)
Gene ID: HRGMv2_2258_6_55
Type: TC
Location: 65983 - 66987 (-)
Gene ID: HRGMv2_2258_6_56
Type: TC
Location: 67001 - 68041 (-)
Gene ID: HRGMv2_2258_6_57
Type: TC
Location: 68055 - 68972 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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