Cluster: HRGMv2_2258_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2258_4 | HRGMv2_2258_4_43 | 49587 | 50411 | - | 3.A.1.1.36 |
| TC | HRGMv2_2258_4 | HRGMv2_2258_4_44 | 50408 | 51274 | - | 3.A.1.1.20 |
| pfam | HRGMv2_2258_4 | HRGMv2_2258_4_45 | 51246 | 52094 | - | Hydrolase | S6PP | Hydrolase_3 |
| TF | HRGMv2_2258_4 | HRGMv2_2258_4_46 | 52280 | 53917 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2258_4 | HRGMv2_2258_4_47 | 54070 | 55689 | - | GH13_29 |
| TC | HRGMv2_2258_4 | HRGMv2_2258_4_48 | 55834 | 57267 | - | 4.A.1.2.13 |
Gene ID: HRGMv2_2258_4_43
Type: TC
Location: 49587 - 50411 (-)
Type: TC
Location: 49587 - 50411 (-)
Gene ID: HRGMv2_2258_4_44
Type: TC
Location: 50408 - 51274 (-)
Type: TC
Location: 50408 - 51274 (-)
Gene ID: HRGMv2_2258_4_45
Type: pfam
Location: 51246 - 52094 (-)
Type: pfam
Location: 51246 - 52094 (-)
Gene ID: HRGMv2_2258_4_46
Type: TF
Location: 52280 - 53917 (-)
Type: TF
Location: 52280 - 53917 (-)
Gene ID: HRGMv2_2258_4_47
Type: CAZyme
Location: 54070 - 55689 (-)
Type: CAZyme
Location: 54070 - 55689 (-)
Gene ID: HRGMv2_2258_4_48
Type: TC
Location: 55834 - 57267 (-)
Type: TC
Location: 55834 - 57267 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.