Cluster: HRGMv2_2258_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- CGC Family ID: CGCFAM_01537
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2258_74 | HRGMv2_2258_74_3 | 2159 | 3271 | - | 3.A.1.1.26 |
| TF | HRGMv2_2258_74 | HRGMv2_2258_74_4 | 3614 | 4477 | - | LacI |
| CAZyme | HRGMv2_2258_74 | HRGMv2_2258_74_5 | 4556 | 7561 | - | GH2 |
| TC | HRGMv2_2258_74 | HRGMv2_2258_74_6 | 7913 | 9292 | + | 3.A.1.1.34 |
| TC | HRGMv2_2258_74 | HRGMv2_2258_74_7 | 9258 | 10046 | + | 3.A.1.1.4 |
| TC | HRGMv2_2258_74 | HRGMv2_2258_74_8 | 10048 | 10863 | + | 3.A.1.1.34 |
Gene ID: HRGMv2_2258_74_3
Type: TC
Location: 2159 - 3271 (-)
Type: TC
Location: 2159 - 3271 (-)
Gene ID: HRGMv2_2258_74_4
Type: TF
Location: 3614 - 4477 (-)
Type: TF
Location: 3614 - 4477 (-)
Gene ID: HRGMv2_2258_74_5
Type: CAZyme
Location: 4556 - 7561 (-)
Type: CAZyme
Location: 4556 - 7561 (-)
Gene ID: HRGMv2_2258_74_6
Type: TC
Location: 7913 - 9292 (+)
Type: TC
Location: 7913 - 9292 (+)
Gene ID: HRGMv2_2258_74_7
Type: TC
Location: 9258 - 10046 (+)
Type: TC
Location: 9258 - 10046 (+)
Gene ID: HRGMv2_2258_74_8
Type: TC
Location: 10048 - 10863 (+)
Type: TC
Location: 10048 - 10863 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.