Cluster: HRGMv2_2258_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2258_44 | HRGMv2_2258_44_12 | 9949 | 11040 | + | GH170 |
| pfam | HRGMv2_2258_44 | HRGMv2_2258_44_13 | 11229 | 11756 | - | Ribosomal_S30AE | Ribosom_S30AE_C |
| TC | HRGMv2_2258_44 | HRGMv2_2258_44_14 | 12683 | 15439 | + | 3.A.5.1.3 |
Gene ID: HRGMv2_2258_44_12
Type: CAZyme
Location: 9949 - 11040 (+)
Type: CAZyme
Location: 9949 - 11040 (+)
Gene ID: HRGMv2_2258_44_13
Type: pfam
Location: 11229 - 11756 (-)
Type: pfam
Location: 11229 - 11756 (-)
Gene ID: HRGMv2_2258_44_14
Type: TC
Location: 12683 - 15439 (+)
Type: TC
Location: 12683 - 15439 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.