Cluster: HRGMv2_2258_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- CGC Family ID: CGCFAM_00950
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2258_35 | HRGMv2_2258_35_17 | 17643 | 18533 | - | GT2 |
| TC | HRGMv2_2258_35 | HRGMv2_2258_35_18 | 18533 | 19231 | - | 9.B.18.1.2 |
| pfam | HRGMv2_2258_35 | HRGMv2_2258_35_19 | 19209 | 20219 | - | LytR_cpsA_psr |
| pfam | HRGMv2_2258_35 | HRGMv2_2258_35_20 | 20270 | 20986 | - | CpsB_CapC |
| TC | HRGMv2_2258_35 | HRGMv2_2258_35_21 | 20983 | 22506 | - | 8.A.3.1.2 |
Gene ID: HRGMv2_2258_35_17
Type: CAZyme
Location: 17643 - 18533 (-)
Type: CAZyme
Location: 17643 - 18533 (-)
Gene ID: HRGMv2_2258_35_18
Type: TC
Location: 18533 - 19231 (-)
Type: TC
Location: 18533 - 19231 (-)
Gene ID: HRGMv2_2258_35_19
Type: pfam
Location: 19209 - 20219 (-)
Type: pfam
Location: 19209 - 20219 (-)
Gene ID: HRGMv2_2258_35_20
Type: pfam
Location: 20270 - 20986 (-)
Type: pfam
Location: 20270 - 20986 (-)
Gene ID: HRGMv2_2258_35_21
Type: TC
Location: 20983 - 22506 (-)
Type: TC
Location: 20983 - 22506 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.