Cluster: HRGMv2_2258_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- CGC Family ID: CGCFAM_00046
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2258_33 | HRGMv2_2258_33_18 | 13524 | 15974 | - | GT35 |
| pfam | HRGMv2_2258_33 | HRGMv2_2258_33_19 | 16134 | 19484 | - | tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915 |
| TC | HRGMv2_2258_33 | HRGMv2_2258_33_20 | 19842 | 20819 | - | 3.A.1.2.16 |
| TC | HRGMv2_2258_33 | HRGMv2_2258_33_21 | 20806 | 22551 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2258_33_18
Type: CAZyme
Location: 13524 - 15974 (-)
Type: CAZyme
Location: 13524 - 15974 (-)
Gene ID: HRGMv2_2258_33_19
Type: pfam
Location: 16134 - 19484 (-)
Type: pfam
Location: 16134 - 19484 (-)
Gene ID: HRGMv2_2258_33_20
Type: TC
Location: 19842 - 20819 (-)
Type: TC
Location: 19842 - 20819 (-)
Gene ID: HRGMv2_2258_33_21
Type: TC
Location: 20806 - 22551 (-)
Type: TC
Location: 20806 - 22551 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.