Cluster: HRGMv2_2258_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2258
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2258_25 | HRGMv2_2258_25_23 | 28893 | 29957 | + | GT28 |
| STP | HRGMv2_2258_25 | HRGMv2_2258_25_24 | 29926 | 30495 | - | Sigma70_r4_2 |
| pfam | HRGMv2_2258_25 | HRGMv2_2258_25_25 | 30504 | 30926 | - | HIT | DcpS_C |
| TC | HRGMv2_2258_25 | HRGMv2_2258_25_26 | 30948 | 31565 | - | 9.B.104.1.3 |
Gene ID: HRGMv2_2258_25_23
Type: CAZyme
Location: 28893 - 29957 (+)
Type: CAZyme
Location: 28893 - 29957 (+)
Gene ID: HRGMv2_2258_25_24
Type: STP
Location: 29926 - 30495 (-)
Type: STP
Location: 29926 - 30495 (-)
Gene ID: HRGMv2_2258_25_25
Type: pfam
Location: 30504 - 30926 (-)
Type: pfam
Location: 30504 - 30926 (-)
Gene ID: HRGMv2_2258_25_26
Type: TC
Location: 30948 - 31565 (-)
Type: TC
Location: 30948 - 31565 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.