Cluster: HRGMv2_2258_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2258
- CGC Family ID: CGCFAM_04923
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2258_2 | HRGMv2_2258_2_80 | 86924 | 87763 | + | GT2 |
| CAZyme | HRGMv2_2258_2 | HRGMv2_2258_2_81 | 87773 | 88834 | + | GT2 |
| CAZyme | HRGMv2_2258_2 | HRGMv2_2258_2_82 | 88925 | 89632 | + | GT2 |
| pfam | HRGMv2_2258_2 | HRGMv2_2258_2_83 | 89635 | 90015 | + | DUF2304 |
| pfam | HRGMv2_2258_2 | HRGMv2_2258_2_84 | 90195 | 90749 | + | dTDP_sugar_isom |
| TC | HRGMv2_2258_2 | HRGMv2_2258_2_85 | 90802 | 91497 | + | 3.A.1.104.1 |
Gene ID: HRGMv2_2258_2_80
Type: CAZyme
Location: 86924 - 87763 (+)
Type: CAZyme
Location: 86924 - 87763 (+)
Gene ID: HRGMv2_2258_2_81
Type: CAZyme
Location: 87773 - 88834 (+)
Type: CAZyme
Location: 87773 - 88834 (+)
Gene ID: HRGMv2_2258_2_82
Type: CAZyme
Location: 88925 - 89632 (+)
Type: CAZyme
Location: 88925 - 89632 (+)
Gene ID: HRGMv2_2258_2_83
Type: pfam
Location: 89635 - 90015 (+)
Type: pfam
Location: 89635 - 90015 (+)
Gene ID: HRGMv2_2258_2_84
Type: pfam
Location: 90195 - 90749 (+)
Type: pfam
Location: 90195 - 90749 (+)
Gene ID: HRGMv2_2258_2_85
Type: TC
Location: 90802 - 91497 (+)
Type: TC
Location: 90802 - 91497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Otoolea
Species
Otoolea sp019423835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.