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Cluster: HRGMv2_2248_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2248_11 HRGMv2_2248_11_23 21138 23633 - GT35
pfam HRGMv2_2248_11 HRGMv2_2248_11_24 23663 26815 - tRNA-synt_1 | Anticodon_1 | tRNA-synt_1g | tRNA-synt_1g | DUF5915
pfam HRGMv2_2248_11 HRGMv2_2248_11_25 27257 28501 + Biotin_lipoyl_2
TC HRGMv2_2248_11 HRGMv2_2248_11_26 28498 29211 + 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_2248_11 HRGMv2_2248_11_27 29177 30745 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2248_11 HRGMv2_2248_11_28 30760 32010 + 3.A.1.122.2
pfam HRGMv2_2248_11 HRGMv2_2248_11_29 32257 33000 + Hydrolase_3
CAZyme HRGMv2_2248_11 HRGMv2_2248_11_30 33096 34784 - GH18
Gene ID: HRGMv2_2248_11_23
Type: CAZyme
Location: 21138 - 23633 (-)
Gene ID: HRGMv2_2248_11_24
Type: pfam
Location: 23663 - 26815 (-)
Gene ID: HRGMv2_2248_11_25
Type: pfam
Location: 27257 - 28501 (+)
Gene ID: HRGMv2_2248_11_26
Type: TC
Location: 28498 - 29211 (+)
Gene ID: HRGMv2_2248_11_27
Type:
Location: 29177 - 30745 (+)
Gene ID: HRGMv2_2248_11_28
Type: TC
Location: 30760 - 32010 (+)
Gene ID: HRGMv2_2248_11_29
Type: pfam
Location: 32257 - 33000 (+)
Gene ID: HRGMv2_2248_11_30
Type: CAZyme
Location: 33096 - 34784 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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