Cluster: HRGMv2_2248_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2248
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2248_4 | HRGMv2_2248_4_60 | 65511 | 66233 | + | CE4 |
| pfam | HRGMv2_2248_4 | HRGMv2_2248_4_61 | 66243 | 67157 | + | AP_endonuc_2 |
| STP | HRGMv2_2248_4 | HRGMv2_2248_4_62 | 67154 | 68416 | + | Aminotran_1_2 |
| TC | HRGMv2_2248_4 | HRGMv2_2248_4_63 | 68598 | 70004 | + | 2.A.25.1.4 |
| NULL(UNKNOWN) | HRGMv2_2248_4 | HRGMv2_2248_4_64 | 70532 | 70972 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2248_4 | HRGMv2_2248_4_65 | 70976 | 71335 | + | 9.B.55.2.1 |
Gene ID: HRGMv2_2248_4_60
Type: CAZyme
Location: 65511 - 66233 (+)
Type: CAZyme
Location: 65511 - 66233 (+)
Gene ID: HRGMv2_2248_4_61
Type: pfam
Location: 66243 - 67157 (+)
Type: pfam
Location: 66243 - 67157 (+)
Gene ID: HRGMv2_2248_4_62
Type: STP
Location: 67154 - 68416 (+)
Type: STP
Location: 67154 - 68416 (+)
Gene ID: HRGMv2_2248_4_63
Type: TC
Location: 68598 - 70004 (+)
Type: TC
Location: 68598 - 70004 (+)
Gene ID: HRGMv2_2248_4_64
Type:
Location: 70532 - 70972 (+)
Type:
Location: 70532 - 70972 (+)
Gene ID: HRGMv2_2248_4_65
Type: TC
Location: 70976 - 71335 (+)
Type: TC
Location: 70976 - 71335 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900757195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.