Cluster: HRGMv2_2248_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2248
- CGC Family ID: CGCFAM_01032
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2248_4 | HRGMv2_2248_4_24 | 26170 | 27096 | + | GT2 |
| pfam | HRGMv2_2248_4 | HRGMv2_2248_4_25 | 27393 | 28055 | + | TENA_THI-4 |
| TC | HRGMv2_2248_4 | HRGMv2_2248_4_26 | 28059 | 28808 | + | 3.A.1.17.8 |
| TC | HRGMv2_2248_4 | HRGMv2_2248_4_27 | 28810 | 29553 | + | 3.A.1.17.8 |
| TC | HRGMv2_2248_4 | HRGMv2_2248_4_28 | 29550 | 30596 | + | 3.A.1.17.13 |
Gene ID: HRGMv2_2248_4_24
Type: CAZyme
Location: 26170 - 27096 (+)
Type: CAZyme
Location: 26170 - 27096 (+)
Gene ID: HRGMv2_2248_4_25
Type: pfam
Location: 27393 - 28055 (+)
Type: pfam
Location: 27393 - 28055 (+)
Gene ID: HRGMv2_2248_4_26
Type: TC
Location: 28059 - 28808 (+)
Type: TC
Location: 28059 - 28808 (+)
Gene ID: HRGMv2_2248_4_27
Type: TC
Location: 28810 - 29553 (+)
Type: TC
Location: 28810 - 29553 (+)
Gene ID: HRGMv2_2248_4_28
Type: TC
Location: 29550 - 30596 (+)
Type: TC
Location: 29550 - 30596 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900757195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.