Cluster: HRGMv2_2248_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2248
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2248_2 | HRGMv2_2248_2_67 | 79107 | 80453 | + | GH13_20 |
| CAZyme | HRGMv2_2248_2 | HRGMv2_2248_2_68 | 80464 | 82497 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2248_2 | HRGMv2_2248_2_69 | 82558 | 82833 | + | BofA |
| NULL(UNKNOWN) | HRGMv2_2248_2 | HRGMv2_2248_2_70 | 83048 | 83899 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2248_2 | HRGMv2_2248_2_71 | 83913 | 85202 | + | 3.A.7.15.1 |
Gene ID: HRGMv2_2248_2_67
Type: CAZyme
Location: 79107 - 80453 (+)
Type: CAZyme
Location: 79107 - 80453 (+)
Gene ID: HRGMv2_2248_2_68
Type: CAZyme
Location: 80464 - 82497 (+)
Type: CAZyme
Location: 80464 - 82497 (+)
Gene ID: HRGMv2_2248_2_69
Type: pfam
Location: 82558 - 82833 (+)
Type: pfam
Location: 82558 - 82833 (+)
Gene ID: HRGMv2_2248_2_70
Type:
Location: 83048 - 83899 (+)
Type:
Location: 83048 - 83899 (+)
Gene ID: HRGMv2_2248_2_71
Type: TC
Location: 83913 - 85202 (+)
Type: TC
Location: 83913 - 85202 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900757195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.