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Cluster: HRGMv2_2248_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2248_1 HRGMv2_2248_1_62 60142 61080 - GT2
CAZyme HRGMv2_2248_1 HRGMv2_2248_1_63 61053 62255 - GT2
TC HRGMv2_2248_1 HRGMv2_2248_1_64 62272 63012 - 3.A.1.103.1
TC HRGMv2_2248_1 HRGMv2_2248_1_65 63024 63812 - 3.A.1.103.6
CAZyme HRGMv2_2248_1 HRGMv2_2248_1_66 63875 64879 - GT2
TC HRGMv2_2248_1 HRGMv2_2248_1_67 65553 67682 - 3.A.7.7.1
TC HRGMv2_2248_1 HRGMv2_2248_1_68 67705 68580 - 2.A.115.1.2
TC HRGMv2_2248_1 HRGMv2_2248_1_69 68710 69651 - 3.A.1.2.18
TC HRGMv2_2248_1 HRGMv2_2248_1_70 69667 70698 - 3.A.1.2.12
TC HRGMv2_2248_1 HRGMv2_2248_1_71 70698 72218 - 3.A.1.2.17
Gene ID: HRGMv2_2248_1_62
Type: CAZyme
Location: 60142 - 61080 (-)
Gene ID: HRGMv2_2248_1_63
Type: CAZyme
Location: 61053 - 62255 (-)
Gene ID: HRGMv2_2248_1_64
Type: TC
Location: 62272 - 63012 (-)
Gene ID: HRGMv2_2248_1_65
Type: TC
Location: 63024 - 63812 (-)
Gene ID: HRGMv2_2248_1_66
Type: CAZyme
Location: 63875 - 64879 (-)
Gene ID: HRGMv2_2248_1_67
Type: TC
Location: 65553 - 67682 (-)
Gene ID: HRGMv2_2248_1_68
Type: TC
Location: 67705 - 68580 (-)
Gene ID: HRGMv2_2248_1_69
Type: TC
Location: 68710 - 69651 (-)
Gene ID: HRGMv2_2248_1_70
Type: TC
Location: 69667 - 70698 (-)
Gene ID: HRGMv2_2248_1_71
Type: TC
Location: 70698 - 72218 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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