Cluster: HRGMv2_2248_CGC10
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2248
- CGC Family ID: CGCFAM_00086
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2248_14 | HRGMv2_2248_14_29 | 28946 | 30490 | - | 2.A.14.1.3 |
| TC | HRGMv2_2248_14 | HRGMv2_2248_14_30 | 31091 | 33190 | - | 4.A.1.1.14 |
| CAZyme | HRGMv2_2248_14 | HRGMv2_2248_14_31 | 33591 | 35699 | - | GH13_39 |
| TC | HRGMv2_2248_14 | HRGMv2_2248_14_32 | 36137 | 38002 | - | 3.A.16.1.1 |
Gene ID: HRGMv2_2248_14_29
Type: TC
Location: 28946 - 30490 (-)
Type: TC
Location: 28946 - 30490 (-)
Gene ID: HRGMv2_2248_14_30
Type: TC
Location: 31091 - 33190 (-)
Type: TC
Location: 31091 - 33190 (-)
Gene ID: HRGMv2_2248_14_31
Type: CAZyme
Location: 33591 - 35699 (-)
Type: CAZyme
Location: 33591 - 35699 (-)
Gene ID: HRGMv2_2248_14_32
Type: TC
Location: 36137 - 38002 (-)
Type: TC
Location: 36137 - 38002 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Frisingicoccus
Species
Frisingicoccus sp900757195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.