Cluster: HRGMv2_2246_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2246
- CGC Family ID: CGCFAM_00049
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2246_15 | HRGMv2_2246_15_37 | 41685 | 43568 | + | 9.B.18.2.1 |
| TC | HRGMv2_2246_15 | HRGMv2_2246_15_38 | 43574 | 44257 | + | 9.B.18.1.2 |
| STP | HRGMv2_2246_15 | HRGMv2_2246_15_39 | 44315 | 45553 | + | Aminotran_1_2 |
| CAZyme | HRGMv2_2246_15 | HRGMv2_2246_15_40 | 45550 | 46557 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2246_15 | HRGMv2_2246_15_41 | 47100 | 48011 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2246_15 | HRGMv2_2246_15_42 | 48160 | 48873 | + | 3.A.1.134.11 |
Gene ID: HRGMv2_2246_15_37
Type: TC
Location: 41685 - 43568 (+)
Type: TC
Location: 41685 - 43568 (+)
Gene ID: HRGMv2_2246_15_38
Type: TC
Location: 43574 - 44257 (+)
Type: TC
Location: 43574 - 44257 (+)
Gene ID: HRGMv2_2246_15_39
Type: STP
Location: 44315 - 45553 (+)
Type: STP
Location: 44315 - 45553 (+)
Gene ID: HRGMv2_2246_15_40
Type: CAZyme
Location: 45550 - 46557 (+)
Type: CAZyme
Location: 45550 - 46557 (+)
Gene ID: HRGMv2_2246_15_41
Type:
Location: 47100 - 48011 (+)
Type:
Location: 47100 - 48011 (+)
Gene ID: HRGMv2_2246_15_42
Type: TC
Location: 48160 - 48873 (+)
Type: TC
Location: 48160 - 48873 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp902464345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.