Cluster: HRGMv2_2246_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2246
- CGC Family ID: CGCFAM_08653
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2246_11 | HRGMv2_2246_11_36 | 40677 | 41387 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_2246_11 | HRGMv2_2246_11_37 | 41529 | 41678 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2246_11 | HRGMv2_2246_11_38 | 41641 | 42261 | - | AgrB |
| TC | HRGMv2_2246_11 | HRGMv2_2246_11_39 | 42487 | 43710 | + | 9.B.14.1.13 |
| TF | HRGMv2_2246_11 | HRGMv2_2246_11_40 | 43716 | 44480 | + | LytTR |
| pfam | HRGMv2_2246_11 | HRGMv2_2246_11_41 | 44557 | 44802 | + | TSCPD |
| CAZyme | HRGMv2_2246_11 | HRGMv2_2246_11_42 | 44812 | 45891 | + | GT28 |
Gene ID: HRGMv2_2246_11_36
Type: CAZyme
Location: 40677 - 41387 (+)
Type: CAZyme
Location: 40677 - 41387 (+)
Gene ID: HRGMv2_2246_11_37
Type:
Location: 41529 - 41678 (-)
Type:
Location: 41529 - 41678 (-)
Gene ID: HRGMv2_2246_11_38
Type: pfam
Location: 41641 - 42261 (-)
Type: pfam
Location: 41641 - 42261 (-)
Gene ID: HRGMv2_2246_11_39
Type: TC
Location: 42487 - 43710 (+)
Type: TC
Location: 42487 - 43710 (+)
Gene ID: HRGMv2_2246_11_40
Type: TF
Location: 43716 - 44480 (+)
Type: TF
Location: 43716 - 44480 (+)
Gene ID: HRGMv2_2246_11_41
Type: pfam
Location: 44557 - 44802 (+)
Type: pfam
Location: 44557 - 44802 (+)
Gene ID: HRGMv2_2246_11_42
Type: CAZyme
Location: 44812 - 45891 (+)
Type: CAZyme
Location: 44812 - 45891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp902464345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.