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Cluster: HRGMv2_2246_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2246_3 HRGMv2_2246_3_59 62430 64370 + 9.A.8.1.10
pfam HRGMv2_2246_3 HRGMv2_2246_3_60 64490 65902 + PK | PK_C
pfam HRGMv2_2246_3 HRGMv2_2246_3_61 65944 67224 + IMS | IMS_HHH | IMS_C | IMS_HHH_1
TC HRGMv2_2246_3 HRGMv2_2246_3_62 67181 68929 - 3.A.1.21.1
TC HRGMv2_2246_3 HRGMv2_2246_3_63 68922 70739 - 3.A.1.21.1
TF HRGMv2_2246_3 HRGMv2_2246_3_64 70811 71761 - HTH_AraC
TC HRGMv2_2246_3 HRGMv2_2246_3_65 71762 73279 - 3.A.1.31.2
TC HRGMv2_2246_3 HRGMv2_2246_3_66 73293 73994 - 3.A.1.31.1
TC HRGMv2_2246_3 HRGMv2_2246_3_67 73972 74577 - 3.A.1.31.2
CAZyme HRGMv2_2246_3 HRGMv2_2246_3_68 75037 76386 - GH1
Gene ID: HRGMv2_2246_3_59
Type: TC
Location: 62430 - 64370 (+)
Gene ID: HRGMv2_2246_3_60
Type: pfam
Location: 64490 - 65902 (+)
Gene ID: HRGMv2_2246_3_61
Type: pfam
Location: 65944 - 67224 (+)
Gene ID: HRGMv2_2246_3_62
Type: TC
Location: 67181 - 68929 (-)
Gene ID: HRGMv2_2246_3_63
Type: TC
Location: 68922 - 70739 (-)
Gene ID: HRGMv2_2246_3_64
Type: TF
Location: 70811 - 71761 (-)
Gene ID: HRGMv2_2246_3_65
Type: TC
Location: 71762 - 73279 (-)
Gene ID: HRGMv2_2246_3_66
Type: TC
Location: 73293 - 73994 (-)
Gene ID: HRGMv2_2246_3_67
Type: TC
Location: 73972 - 74577 (-)
Gene ID: HRGMv2_2246_3_68
Type: CAZyme
Location: 75037 - 76386 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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