Cluster: HRGMv2_2246_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2246
- CGC Family ID: CGCFAM_04747
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2246_3 | HRGMv2_2246_3_37 | 38740 | 40551 | - | 2.A.21.9.2 |
| pfam | HRGMv2_2246_3 | HRGMv2_2246_3_38 | 40714 | 41601 | - | NTP_transferase |
| pfam | HRGMv2_2246_3 | HRGMv2_2246_3_39 | 41637 | 44372 | - | YfhO |
| CAZyme | HRGMv2_2246_3 | HRGMv2_2246_3_40 | 44393 | 46612 | - | CBM4 | GH9 |
| pfam | HRGMv2_2246_3 | HRGMv2_2246_3_41 | 46677 | 47459 | - | His_biosynth |
| TC | HRGMv2_2246_3 | HRGMv2_2246_3_42 | 47531 | 48466 | - | 1.A.35.3.2 |
Gene ID: HRGMv2_2246_3_37
Type: TC
Location: 38740 - 40551 (-)
Type: TC
Location: 38740 - 40551 (-)
Gene ID: HRGMv2_2246_3_38
Type: pfam
Location: 40714 - 41601 (-)
Type: pfam
Location: 40714 - 41601 (-)
Gene ID: HRGMv2_2246_3_39
Type: pfam
Location: 41637 - 44372 (-)
Type: pfam
Location: 41637 - 44372 (-)
Gene ID: HRGMv2_2246_3_40
Type: CAZyme
Location: 44393 - 46612 (-)
Type: CAZyme
Location: 44393 - 46612 (-)
Gene ID: HRGMv2_2246_3_41
Type: pfam
Location: 46677 - 47459 (-)
Type: pfam
Location: 46677 - 47459 (-)
Gene ID: HRGMv2_2246_3_42
Type: TC
Location: 47531 - 48466 (-)
Type: TC
Location: 47531 - 48466 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp902464345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.