Cluster: HRGMv2_2246_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2246
- CGC Family ID: CGCFAM_01538
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2246_34 | HRGMv2_2246_34_2 | 1213 | 2712 | + | 3.A.1.2.20 |
| TC | HRGMv2_2246_34 | HRGMv2_2246_34_3 | 2714 | 3718 | + | 3.A.1.2.15 |
| CAZyme | HRGMv2_2246_34 | HRGMv2_2246_34_4 | 3770 | 5245 | + | GH32 |
| STP | HRGMv2_2246_34 | HRGMv2_2246_34_5 | 5258 | 6220 | + | PfkB |
| TC | HRGMv2_2246_34 | HRGMv2_2246_34_6 | 6364 | 6984 | - | 4.F.1.1.8 |
Gene ID: HRGMv2_2246_34_2
Type: TC
Location: 1213 - 2712 (+)
Type: TC
Location: 1213 - 2712 (+)
Gene ID: HRGMv2_2246_34_3
Type: TC
Location: 2714 - 3718 (+)
Type: TC
Location: 2714 - 3718 (+)
Gene ID: HRGMv2_2246_34_4
Type: CAZyme
Location: 3770 - 5245 (+)
Type: CAZyme
Location: 3770 - 5245 (+)
Gene ID: HRGMv2_2246_34_5
Type: STP
Location: 5258 - 6220 (+)
Type: STP
Location: 5258 - 6220 (+)
Gene ID: HRGMv2_2246_34_6
Type: TC
Location: 6364 - 6984 (-)
Type: TC
Location: 6364 - 6984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp902464345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.