Cluster: HRGMv2_2246_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2246
- CGC Family ID: CGCFAM_00593
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2246_33 | HRGMv2_2246_33_26 | 23691 | 24467 | - | 1.B.52.2.1 |
| peptidase | HRGMv2_2246_33 | HRGMv2_2246_33_27 | 24686 | 25852 | + | C40.UPW |
| TC | HRGMv2_2246_33 | HRGMv2_2246_33_28 | 26108 | 28744 | + | 8.A.7.1.5 |
| CAZyme | HRGMv2_2246_33 | HRGMv2_2246_33_29 | 28939 | 30204 | - | GT2 |
Gene ID: HRGMv2_2246_33_26
Type: TC
Location: 23691 - 24467 (-)
Type: TC
Location: 23691 - 24467 (-)
Gene ID: HRGMv2_2246_33_27
Type: peptidase
Location: 24686 - 25852 (+)
Type: peptidase
Location: 24686 - 25852 (+)
Gene ID: HRGMv2_2246_33_28
Type: TC
Location: 26108 - 28744 (+)
Type: TC
Location: 26108 - 28744 (+)
Gene ID: HRGMv2_2246_33_29
Type: CAZyme
Location: 28939 - 30204 (-)
Type: CAZyme
Location: 28939 - 30204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp902464345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.