Cluster: HRGMv2_2246_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2246
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2246_25 | HRGMv2_2246_25_3 | 2311 | 4773 | - | 3.A.9.1.2 |
| TF | HRGMv2_2246_25 | HRGMv2_2246_25_4 | 4820 | 5305 | - | GntR |
| pfam | HRGMv2_2246_25 | HRGMv2_2246_25_5 | 5357 | 6823 | - | Cadherin-like |
| CAZyme | HRGMv2_2246_25 | HRGMv2_2246_25_6 | 6854 | 8908 | - | GH73 |
Gene ID: HRGMv2_2246_25_3
Type: TC
Location: 2311 - 4773 (-)
Type: TC
Location: 2311 - 4773 (-)
Gene ID: HRGMv2_2246_25_4
Type: TF
Location: 4820 - 5305 (-)
Type: TF
Location: 4820 - 5305 (-)
Gene ID: HRGMv2_2246_25_5
Type: pfam
Location: 5357 - 6823 (-)
Type: pfam
Location: 5357 - 6823 (-)
Gene ID: HRGMv2_2246_25_6
Type: CAZyme
Location: 6854 - 8908 (-)
Type: CAZyme
Location: 6854 - 8908 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp902464345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.