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Cluster: HRGMv2_2240_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2240_10 HRGMv2_2240_10_2 229 2040 - 2.A.21.9.2
pfam HRGMv2_2240_10 HRGMv2_2240_10_3 2149 2931 - NTP_transferase
TC HRGMv2_2240_10 HRGMv2_2240_10_4 2900 5647 - 9.B.144.1.5
CAZyme HRGMv2_2240_10 HRGMv2_2240_10_5 5648 7885 - CBM4 | GH9
pfam HRGMv2_2240_10 HRGMv2_2240_10_6 7891 8685 - His_biosynth
NULL(UNKNOWN) HRGMv2_2240_10 HRGMv2_2240_10_7 8682 9701 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2240_10 HRGMv2_2240_10_8 9707 11218 - 8.A.59.2.2
pfam HRGMv2_2240_10 HRGMv2_2240_10_9 11246 12226 - TIR_2
TC HRGMv2_2240_10 HRGMv2_2240_10_10 12286 14085 - 9.B.34.1.3
TC HRGMv2_2240_10 HRGMv2_2240_10_11 14250 15665 + 3.A.24.3.1
TC HRGMv2_2240_10 HRGMv2_2240_10_12 15660 16595 - 1.A.35.3.2
Gene ID: HRGMv2_2240_10_2
Type: TC
Location: 229 - 2040 (-)
Gene ID: HRGMv2_2240_10_3
Type: pfam
Location: 2149 - 2931 (-)
Gene ID: HRGMv2_2240_10_4
Type: TC
Location: 2900 - 5647 (-)
Gene ID: HRGMv2_2240_10_5
Type: CAZyme
Location: 5648 - 7885 (-)
Gene ID: HRGMv2_2240_10_6
Type: pfam
Location: 7891 - 8685 (-)
Gene ID: HRGMv2_2240_10_7
Type:
Location: 8682 - 9701 (-)
Gene ID: HRGMv2_2240_10_8
Type: TC
Location: 9707 - 11218 (-)
Gene ID: HRGMv2_2240_10_9
Type: pfam
Location: 11246 - 12226 (-)
Gene ID: HRGMv2_2240_10_10
Type: TC
Location: 12286 - 14085 (-)
Gene ID: HRGMv2_2240_10_11
Type: TC
Location: 14250 - 15665 (+)
Gene ID: HRGMv2_2240_10_12
Type: TC
Location: 15660 - 16595 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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