Cluster: HRGMv2_2240_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2240
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2240_3 | HRGMv2_2240_3_116 | 142088 | 143614 | - | CE20 |
| CAZyme | HRGMv2_2240_3 | HRGMv2_2240_3_117 | 143619 | 144794 | - | GH130_1 |
| CAZyme | HRGMv2_2240_3 | HRGMv2_2240_3_118 | 144837 | 145862 | - | GH130_2 |
| TC | HRGMv2_2240_3 | HRGMv2_2240_3_119 | 145897 | 146781 | - | 3.A.1.1.18 |
| TC | HRGMv2_2240_3 | HRGMv2_2240_3_120 | 146783 | 147700 | - | 3.A.1.1.28 |
| STP | HRGMv2_2240_3 | HRGMv2_2240_3_121 | 147776 | 149134 | - | SBP_bac_1 |
| TC | HRGMv2_2240_3 | HRGMv2_2240_3_122 | 149392 | 150096 | - | 9.B.28.1.3 |
Gene ID: HRGMv2_2240_3_116
Type: CAZyme
Location: 142088 - 143614 (-)
Type: CAZyme
Location: 142088 - 143614 (-)
Gene ID: HRGMv2_2240_3_117
Type: CAZyme
Location: 143619 - 144794 (-)
Type: CAZyme
Location: 143619 - 144794 (-)
Gene ID: HRGMv2_2240_3_118
Type: CAZyme
Location: 144837 - 145862 (-)
Type: CAZyme
Location: 144837 - 145862 (-)
Gene ID: HRGMv2_2240_3_119
Type: TC
Location: 145897 - 146781 (-)
Type: TC
Location: 145897 - 146781 (-)
Gene ID: HRGMv2_2240_3_120
Type: TC
Location: 146783 - 147700 (-)
Type: TC
Location: 146783 - 147700 (-)
Gene ID: HRGMv2_2240_3_121
Type: STP
Location: 147776 - 149134 (-)
Type: STP
Location: 147776 - 149134 (-)
Gene ID: HRGMv2_2240_3_122
Type: TC
Location: 149392 - 150096 (-)
Type: TC
Location: 149392 - 150096 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp900539185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.