Cluster: HRGMv2_2240_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2240
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2240_26 | HRGMv2_2240_26_3 | 2159 | 4621 | - | 3.A.9.1.2 |
| TF | HRGMv2_2240_26 | HRGMv2_2240_26_4 | 4642 | 5031 | - | GntR |
| pfam | HRGMv2_2240_26 | HRGMv2_2240_26_5 | 5160 | 6752 | - | Cadherin-like |
| CAZyme | HRGMv2_2240_26 | HRGMv2_2240_26_6 | 6767 | 8791 | - | GH73 |
Gene ID: HRGMv2_2240_26_3
Type: TC
Location: 2159 - 4621 (-)
Type: TC
Location: 2159 - 4621 (-)
Gene ID: HRGMv2_2240_26_4
Type: TF
Location: 4642 - 5031 (-)
Type: TF
Location: 4642 - 5031 (-)
Gene ID: HRGMv2_2240_26_5
Type: pfam
Location: 5160 - 6752 (-)
Type: pfam
Location: 5160 - 6752 (-)
Gene ID: HRGMv2_2240_26_6
Type: CAZyme
Location: 6767 - 8791 (-)
Type: CAZyme
Location: 6767 - 8791 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp900539185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.