Cluster: HRGMv2_2240_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2240
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2240_25 | HRGMv2_2240_25_6 | 3730 | 4608 | + | 3.A.1.148.3 |
| NULL(UNKNOWN) | HRGMv2_2240_25 | HRGMv2_2240_25_7 | 4605 | 5828 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2240_25 | HRGMv2_2240_25_8 | 5829 | 6155 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2240_25 | HRGMv2_2240_25_9 | 6397 | 7851 | + | GH32 |
Gene ID: HRGMv2_2240_25_6
Type: TC
Location: 3730 - 4608 (+)
Type: TC
Location: 3730 - 4608 (+)
Gene ID: HRGMv2_2240_25_7
Type:
Location: 4605 - 5828 (+)
Type:
Location: 4605 - 5828 (+)
Gene ID: HRGMv2_2240_25_8
Type:
Location: 5829 - 6155 (+)
Type:
Location: 5829 - 6155 (+)
Gene ID: HRGMv2_2240_25_9
Type: CAZyme
Location: 6397 - 7851 (+)
Type: CAZyme
Location: 6397 - 7851 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp900539185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2240_25_8 | vegetarian > vegan | 1.52010 | 0.04840 |