Cluster: HRGMv2_2240_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2240
- CGC Family ID: CGCFAM_00842
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2240_20 | HRGMv2_2240_20_28 | 23726 | 24613 | + | CE4 |
| pfam | HRGMv2_2240_20 | HRGMv2_2240_20_29 | 24744 | 26102 | + | PGI |
| pfam | HRGMv2_2240_20 | HRGMv2_2240_20_30 | 26207 | 27034 | + | Lipase_GDSL_2 |
| TC | HRGMv2_2240_20 | HRGMv2_2240_20_31 | 27118 | 29214 | + | 1.B.52.2.1 |
Gene ID: HRGMv2_2240_20_28
Type: CAZyme
Location: 23726 - 24613 (+)
Type: CAZyme
Location: 23726 - 24613 (+)
Gene ID: HRGMv2_2240_20_29
Type: pfam
Location: 24744 - 26102 (+)
Type: pfam
Location: 24744 - 26102 (+)
Gene ID: HRGMv2_2240_20_30
Type: pfam
Location: 26207 - 27034 (+)
Type: pfam
Location: 26207 - 27034 (+)
Gene ID: HRGMv2_2240_20_31
Type: TC
Location: 27118 - 29214 (+)
Type: TC
Location: 27118 - 29214 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp900539185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.