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Cluster: HRGMv2_2240_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2240_20 HRGMv2_2240_20_14 12064 12669 + 9.B.156.3.1
TC HRGMv2_2240_20 HRGMv2_2240_20_15 12666 13196 + 9.B.156.3.1
NULL(UNKNOWN) HRGMv2_2240_20 HRGMv2_2240_20_16 13300 13461 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2240_20 HRGMv2_2240_20_17 13538 15331 - DUF885
CAZyme HRGMv2_2240_20 HRGMv2_2240_20_18 15421 16485 - GT28
pfam HRGMv2_2240_20 HRGMv2_2240_20_19 16505 16747 - TSCPD
TF HRGMv2_2240_20 HRGMv2_2240_20_20 16837 17589 - LytTR
TC HRGMv2_2240_20 HRGMv2_2240_20_21 17603 18964 - 9.B.14.1.13
Gene ID: HRGMv2_2240_20_14
Type: TC
Location: 12064 - 12669 (+)
Gene ID: HRGMv2_2240_20_15
Type: TC
Location: 12666 - 13196 (+)
Gene ID: HRGMv2_2240_20_16
Type:
Location: 13300 - 13461 (+)
Gene ID: HRGMv2_2240_20_17
Type: pfam
Location: 13538 - 15331 (-)
Gene ID: HRGMv2_2240_20_18
Type: CAZyme
Location: 15421 - 16485 (-)
Gene ID: HRGMv2_2240_20_19
Type: pfam
Location: 16505 - 16747 (-)
Gene ID: HRGMv2_2240_20_20
Type: TF
Location: 16837 - 17589 (-)
Gene ID: HRGMv2_2240_20_21
Type: TC
Location: 17603 - 18964 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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