Cluster: HRGMv2_2240_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2240
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2240_15 | HRGMv2_2240_15_2 | 775 | 1794 | - | GH25 |
| pfam | HRGMv2_2240_15 | HRGMv2_2240_15_3 | 1895 | 2533 | - | DUF6630 |
| TC | HRGMv2_2240_15 | HRGMv2_2240_15_4 | 2641 | 3060 | - | 4.A.1.2.11 |
| pfam | HRGMv2_2240_15 | HRGMv2_2240_15_5 | 3570 | 4547 | + | HMGL-like |
| TC | HRGMv2_2240_15 | HRGMv2_2240_15_6 | 4684 | 6630 | - | 3.A.3.6.10 |
Gene ID: HRGMv2_2240_15_2
Type: CAZyme
Location: 775 - 1794 (-)
Type: CAZyme
Location: 775 - 1794 (-)
Gene ID: HRGMv2_2240_15_3
Type: pfam
Location: 1895 - 2533 (-)
Type: pfam
Location: 1895 - 2533 (-)
Gene ID: HRGMv2_2240_15_4
Type: TC
Location: 2641 - 3060 (-)
Type: TC
Location: 2641 - 3060 (-)
Gene ID: HRGMv2_2240_15_5
Type: pfam
Location: 3570 - 4547 (+)
Type: pfam
Location: 3570 - 4547 (+)
Gene ID: HRGMv2_2240_15_6
Type: TC
Location: 4684 - 6630 (-)
Type: TC
Location: 4684 - 6630 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp900539185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.