Cluster: HRGMv2_2240_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2240
- CGC Family ID: CGCFAM_01285
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2240_14 | HRGMv2_2240_14_30 | 33464 | 34498 | - | GT2 |
| STP | HRGMv2_2240_14 | HRGMv2_2240_14_31 | 34679 | 35812 | + | Fer4 |
| TF | HRGMv2_2240_14 | HRGMv2_2240_14_32 | 35817 | 36482 | + | Trans_reg_C |
| TC | HRGMv2_2240_14 | HRGMv2_2240_14_33 | 36486 | 37718 | + | 2.A.21.9.2 |
| TC | HRGMv2_2240_14 | HRGMv2_2240_14_34 | 37775 | 38479 | + | 3.A.1.125.3 |
Gene ID: HRGMv2_2240_14_30
Type: CAZyme
Location: 33464 - 34498 (-)
Type: CAZyme
Location: 33464 - 34498 (-)
Gene ID: HRGMv2_2240_14_31
Type: STP
Location: 34679 - 35812 (+)
Type: STP
Location: 34679 - 35812 (+)
Gene ID: HRGMv2_2240_14_32
Type: TF
Location: 35817 - 36482 (+)
Type: TF
Location: 35817 - 36482 (+)
Gene ID: HRGMv2_2240_14_33
Type: TC
Location: 36486 - 37718 (+)
Type: TC
Location: 36486 - 37718 (+)
Gene ID: HRGMv2_2240_14_34
Type: TC
Location: 37775 - 38479 (+)
Type: TC
Location: 37775 - 38479 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
CAG-632
Species
CAG-632 sp900539185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.