Cluster: HRGMv2_2234_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2234
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2234_13 | HRGMv2_2234_13_8 | 8884 | 9441 | + | 3.A.1.25.5 |
| CAZyme | HRGMv2_2234_13 | HRGMv2_2234_13_9 | 9618 | 11729 | + | GH13_11 |
| pfam | HRGMv2_2234_13 | HRGMv2_2234_13_10 | 12008 | 13222 | + | Peripla_BP_4 |
| TC | HRGMv2_2234_13 | HRGMv2_2234_13_11 | 13320 | 14267 | + | 3.A.1.2.18 |
| TC | HRGMv2_2234_13 | HRGMv2_2234_13_12 | 14287 | 15786 | + | 3.A.1.2.20 |
| TC | HRGMv2_2234_13 | HRGMv2_2234_13_13 | 15797 | 16762 | + | 3.A.1.2.21 |
Gene ID: HRGMv2_2234_13_8
Type: TC
Location: 8884 - 9441 (+)
Type: TC
Location: 8884 - 9441 (+)
Gene ID: HRGMv2_2234_13_9
Type: CAZyme
Location: 9618 - 11729 (+)
Type: CAZyme
Location: 9618 - 11729 (+)
Gene ID: HRGMv2_2234_13_10
Type: pfam
Location: 12008 - 13222 (+)
Type: pfam
Location: 12008 - 13222 (+)
Gene ID: HRGMv2_2234_13_11
Type: TC
Location: 13320 - 14267 (+)
Type: TC
Location: 13320 - 14267 (+)
Gene ID: HRGMv2_2234_13_12
Type: TC
Location: 14287 - 15786 (+)
Type: TC
Location: 14287 - 15786 (+)
Gene ID: HRGMv2_2234_13_13
Type: TC
Location: 15797 - 16762 (+)
Type: TC
Location: 15797 - 16762 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
W0P33-017
Species
W0P33-017 sp934351445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.