Cluster: HRGMv2_2234_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2234
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2234_3 | HRGMv2_2234_3_36 | 47397 | 48809 | - | 1.A.26.1.1 |
| STP | HRGMv2_2234_3 | HRGMv2_2234_3_37 | 48872 | 50752 | - | EAL |
| pfam | HRGMv2_2234_3 | HRGMv2_2234_3_38 | 50815 | 51633 | - | DUF6612 |
| CAZyme | HRGMv2_2234_3 | HRGMv2_2234_3_39 | 51948 | 52733 | - | GH23 |
Gene ID: HRGMv2_2234_3_36
Type: TC
Location: 47397 - 48809 (-)
Type: TC
Location: 47397 - 48809 (-)
Gene ID: HRGMv2_2234_3_37
Type: STP
Location: 48872 - 50752 (-)
Type: STP
Location: 48872 - 50752 (-)
Gene ID: HRGMv2_2234_3_38
Type: pfam
Location: 50815 - 51633 (-)
Type: pfam
Location: 50815 - 51633 (-)
Gene ID: HRGMv2_2234_3_39
Type: CAZyme
Location: 51948 - 52733 (-)
Type: CAZyme
Location: 51948 - 52733 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
W0P33-017
Species
W0P33-017 sp934351445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.