Cluster: HRGMv2_2234_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2234
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2234_87 | HRGMv2_2234_87_2 | 601 | 1896 | - | GH136 |
| NULL(UNKNOWN) | HRGMv2_2234_87 | HRGMv2_2234_87_3 | 1847 | 2338 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2234_87 | HRGMv2_2234_87_4 | 2338 | 3144 | - | 3.A.1.1.4 |
| TC | HRGMv2_2234_87 | HRGMv2_2234_87_5 | 3137 | 4015 | - | 3.A.1.1.4 |
| TC | HRGMv2_2234_87 | HRGMv2_2234_87_6 | 4090 | 5478 | - | 3.A.1.1.4 |
| CAZyme | HRGMv2_2234_87 | HRGMv2_2234_87_7 | 5596 | 7752 | - | GH112 |
Gene ID: HRGMv2_2234_87_2
Type: CAZyme
Location: 601 - 1896 (-)
Type: CAZyme
Location: 601 - 1896 (-)
Gene ID: HRGMv2_2234_87_3
Type:
Location: 1847 - 2338 (-)
Type:
Location: 1847 - 2338 (-)
Gene ID: HRGMv2_2234_87_4
Type: TC
Location: 2338 - 3144 (-)
Type: TC
Location: 2338 - 3144 (-)
Gene ID: HRGMv2_2234_87_5
Type: TC
Location: 3137 - 4015 (-)
Type: TC
Location: 3137 - 4015 (-)
Gene ID: HRGMv2_2234_87_6
Type: TC
Location: 4090 - 5478 (-)
Type: TC
Location: 4090 - 5478 (-)
Gene ID: HRGMv2_2234_87_7
Type: CAZyme
Location: 5596 - 7752 (-)
Type: CAZyme
Location: 5596 - 7752 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
W0P33-017
Species
W0P33-017 sp934351445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.