dbCAN Logo

Cluster: HRGMv2_2234_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2234_1 HRGMv2_2234_1_132 128420 129571 - CE4
TC HRGMv2_2234_1 HRGMv2_2234_1_133 129687 130493 - 3.D.6.1.3
TC HRGMv2_2234_1 HRGMv2_2234_1_134 130507 131103 - 3.D.6.1.4
TC HRGMv2_2234_1 HRGMv2_2234_1_135 131103 131804 - 3.D.6.1.2
TC HRGMv2_2234_1 HRGMv2_2234_1_136 131804 132415 - 3.D.6.1.2
TC HRGMv2_2234_1 HRGMv2_2234_1_137 132417 133358 - 3.D.6.1.2
TC HRGMv2_2234_1 HRGMv2_2234_1_138 133376 134698 - 3.D.6.1.2
Gene ID: HRGMv2_2234_1_132
Type: CAZyme
Location: 128420 - 129571 (-)
Gene ID: HRGMv2_2234_1_133
Type: TC
Location: 129687 - 130493 (-)
Gene ID: HRGMv2_2234_1_134
Type: TC
Location: 130507 - 131103 (-)
Gene ID: HRGMv2_2234_1_135
Type: TC
Location: 131103 - 131804 (-)
Gene ID: HRGMv2_2234_1_136
Type: TC
Location: 131804 - 132415 (-)
Gene ID: HRGMv2_2234_1_137
Type: TC
Location: 132417 - 133358 (-)
Gene ID: HRGMv2_2234_1_138
Type: TC
Location: 133376 - 134698 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2234_1_134 vegetarian > vegan 1.60424 0.01882

🧭 Explore Read Mapping of CGC

← Back to Cluster List