Cluster: HRGMv2_2234_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2234
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2234_34 | HRGMv2_2234_34_22 | 15731 | 17182 | + | GT5 |
| peptidase | HRGMv2_2234_34 | HRGMv2_2234_34_23 | 17345 | 18103 | + | S14.UPW |
| pfam | HRGMv2_2234_34 | HRGMv2_2234_34_24 | 18180 | 19055 | + | BacA |
| TC | HRGMv2_2234_34 | HRGMv2_2234_34_25 | 19092 | 21899 | + | 3.A.12.1.1 |
Gene ID: HRGMv2_2234_34_22
Type: CAZyme
Location: 15731 - 17182 (+)
Type: CAZyme
Location: 15731 - 17182 (+)
Gene ID: HRGMv2_2234_34_23
Type: peptidase
Location: 17345 - 18103 (+)
Type: peptidase
Location: 17345 - 18103 (+)
Gene ID: HRGMv2_2234_34_24
Type: pfam
Location: 18180 - 19055 (+)
Type: pfam
Location: 18180 - 19055 (+)
Gene ID: HRGMv2_2234_34_25
Type: TC
Location: 19092 - 21899 (+)
Type: TC
Location: 19092 - 21899 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
W0P33-017
Species
W0P33-017 sp934351445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.