Cluster: HRGMv2_2234_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2234
- CGC Family ID: CGCFAM_08476
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2234_14 | HRGMv2_2234_14_4 | 4356 | 5732 | + | 2.A.86.1.11 |
| STP | HRGMv2_2234_14 | HRGMv2_2234_14_5 | 5919 | 8492 | + | TPR_2 |
| CAZyme | HRGMv2_2234_14 | HRGMv2_2234_14_6 | 8524 | 10428 | + | CBM48 | GH13_9 |
Gene ID: HRGMv2_2234_14_4
Type: TC
Location: 4356 - 5732 (+)
Type: TC
Location: 4356 - 5732 (+)
Gene ID: HRGMv2_2234_14_5
Type: STP
Location: 5919 - 8492 (+)
Type: STP
Location: 5919 - 8492 (+)
Gene ID: HRGMv2_2234_14_6
Type: CAZyme
Location: 8524 - 10428 (+)
Type: CAZyme
Location: 8524 - 10428 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
W0P33-017
Species
W0P33-017 sp934351445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.