dbCAN Logo

Cluster: HRGMv2_2234_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2234_1 HRGMv2_2234_1_8 7613 8977 + 2.A.2.3.3
CAZyme HRGMv2_2234_1 HRGMv2_2234_1_9 8965 10539 + GH78
STP HRGMv2_2234_1 HRGMv2_2234_1_10 10628 10858 + PTS-HPr
CAZyme HRGMv2_2234_1 HRGMv2_2234_1_11 10883 13357 + GH3
TC HRGMv2_2234_1 HRGMv2_2234_1_12 13654 14796 + 2.A.86.1.3
STP HRGMv2_2234_1 HRGMv2_2234_1_13 15005 15262 + PTS-HPr
sulfatase HRGMv2_2234_1 HRGMv2_2234_1_14 15389 16117 + S1_9
CAZyme HRGMv2_2234_1 HRGMv2_2234_1_15 16141 17280 + CE9
TC HRGMv2_2234_1 HRGMv2_2234_1_16 17274 17753 + 4.A.1.2.11
TC HRGMv2_2234_1 HRGMv2_2234_1_17 17826 19295 + 4.A.1.1.7
Gene ID: HRGMv2_2234_1_8
Type: TC
Location: 7613 - 8977 (+)
Gene ID: HRGMv2_2234_1_9
Type: CAZyme
Location: 8965 - 10539 (+)
Gene ID: HRGMv2_2234_1_10
Type: STP
Location: 10628 - 10858 (+)
Gene ID: HRGMv2_2234_1_11
Type: CAZyme
Location: 10883 - 13357 (+)
Gene ID: HRGMv2_2234_1_12
Type: TC
Location: 13654 - 14796 (+)
Gene ID: HRGMv2_2234_1_13
Type: STP
Location: 15005 - 15262 (+)
Gene ID: HRGMv2_2234_1_14
Type: sulfatase
Location: 15389 - 16117 (+)
Gene ID: HRGMv2_2234_1_15
Type: CAZyme
Location: 16141 - 17280 (+)
Gene ID: HRGMv2_2234_1_16
Type: TC
Location: 17274 - 17753 (+)
Gene ID: HRGMv2_2234_1_17
Type: TC
Location: 17826 - 19295 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List