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Cluster: HRGMv2_2231_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2231_3 HRGMv2_2231_3_73 78385 79320 + GT2
CAZyme HRGMv2_2231_3 HRGMv2_2231_3_74 79321 80724 + GT83
NULL(UNKNOWN) HRGMv2_2231_3 HRGMv2_2231_3_75 80690 83155 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2231_3 HRGMv2_2231_3_76 83159 85039 + 9.B.18.2.1
pfam HRGMv2_2231_3 HRGMv2_2231_3_77 85032 86315 + DegT_DnrJ_EryC1 | Beta_elim_lyase
TC HRGMv2_2231_3 HRGMv2_2231_3_78 86344 86991 + 9.B.18.1.2
NULL(UNKNOWN) HRGMv2_2231_3 HRGMv2_2231_3_79 86957 88978 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2231_3 HRGMv2_2231_3_80 88965 90020 + FemAB | FemAB | FemAB_like | Acetyltransf_6
CAZyme HRGMv2_2231_3 HRGMv2_2231_3_81 90017 91129 + GT4
Gene ID: HRGMv2_2231_3_73
Type: CAZyme
Location: 78385 - 79320 (+)
Gene ID: HRGMv2_2231_3_74
Type: CAZyme
Location: 79321 - 80724 (+)
Gene ID: HRGMv2_2231_3_75
Type:
Location: 80690 - 83155 (+)
Gene ID: HRGMv2_2231_3_76
Type: TC
Location: 83159 - 85039 (+)
Gene ID: HRGMv2_2231_3_77
Type: pfam
Location: 85032 - 86315 (+)
Gene ID: HRGMv2_2231_3_78
Type: TC
Location: 86344 - 86991 (+)
Gene ID: HRGMv2_2231_3_79
Type:
Location: 86957 - 88978 (+)
Gene ID: HRGMv2_2231_3_80
Type: pfam
Location: 88965 - 90020 (+)
Gene ID: HRGMv2_2231_3_81
Type: CAZyme
Location: 90017 - 91129 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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