Cluster: HRGMv2_2231_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2231
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2231_61 | HRGMv2_2231_61_5 | 4817 | 5716 | + | 3.A.1.1.28 |
| TC | HRGMv2_2231_61 | HRGMv2_2231_61_6 | 5738 | 6604 | + | 3.A.1.1.34 |
| STP | HRGMv2_2231_61 | HRGMv2_2231_61_7 | 6631 | 7536 | + | SIS |
| pfam | HRGMv2_2231_61 | HRGMv2_2231_61_8 | 7549 | 8736 | + | AnmK |
| CAZyme | HRGMv2_2231_61 | HRGMv2_2231_61_9 | 8798 | 9940 | + | GH171 |
| CAZyme | HRGMv2_2231_61 | HRGMv2_2231_61_10 | 9965 | 11497 | + | GH3 |
Gene ID: HRGMv2_2231_61_5
Type: TC
Location: 4817 - 5716 (+)
Type: TC
Location: 4817 - 5716 (+)
Gene ID: HRGMv2_2231_61_6
Type: TC
Location: 5738 - 6604 (+)
Type: TC
Location: 5738 - 6604 (+)
Gene ID: HRGMv2_2231_61_7
Type: STP
Location: 6631 - 7536 (+)
Type: STP
Location: 6631 - 7536 (+)
Gene ID: HRGMv2_2231_61_8
Type: pfam
Location: 7549 - 8736 (+)
Type: pfam
Location: 7549 - 8736 (+)
Gene ID: HRGMv2_2231_61_9
Type: CAZyme
Location: 8798 - 9940 (+)
Type: CAZyme
Location: 8798 - 9940 (+)
Gene ID: HRGMv2_2231_61_10
Type: CAZyme
Location: 9965 - 11497 (+)
Type: CAZyme
Location: 9965 - 11497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.