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Cluster: HRGMv2_2231_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2231_41 HRGMv2_2231_41_1 193 1614 - 3.A.1.106.2
pfam HRGMv2_2231_41 HRGMv2_2231_41_2 1878 2495 + DDE_Tnp_1_6
TC HRGMv2_2231_41 HRGMv2_2231_41_3 3282 4280 - 8.A.5.1.4
CAZyme HRGMv2_2231_41 HRGMv2_2231_41_4 4343 5806 - GH32
pfam HRGMv2_2231_41 HRGMv2_2231_41_5 5832 6764 - DHDPS
TC HRGMv2_2231_41 HRGMv2_2231_41_6 6787 7743 - 3.A.1.2.19
TC HRGMv2_2231_41 HRGMv2_2231_41_7 7750 9246 - 3.A.1.2.20
STP HRGMv2_2231_41 HRGMv2_2231_41_8 9313 10464 - Peripla_BP_1
TC HRGMv2_2231_41 HRGMv2_2231_41_9 10595 12010 - 3.A.1.2.3
TC HRGMv2_2231_41 HRGMv2_2231_41_10 12000 12995 - 8.A.59.2.1
Gene ID: HRGMv2_2231_41_1
Type: TC
Location: 193 - 1614 (-)
Gene ID: HRGMv2_2231_41_2
Type: pfam
Location: 1878 - 2495 (+)
Gene ID: HRGMv2_2231_41_3
Type: TC
Location: 3282 - 4280 (-)
Gene ID: HRGMv2_2231_41_4
Type: CAZyme
Location: 4343 - 5806 (-)
Gene ID: HRGMv2_2231_41_5
Type: pfam
Location: 5832 - 6764 (-)
Gene ID: HRGMv2_2231_41_6
Type: TC
Location: 6787 - 7743 (-)
Gene ID: HRGMv2_2231_41_7
Type: TC
Location: 7750 - 9246 (-)
Gene ID: HRGMv2_2231_41_8
Type: STP
Location: 9313 - 10464 (-)
Gene ID: HRGMv2_2231_41_9
Type: TC
Location: 10595 - 12010 (-)
Gene ID: HRGMv2_2231_41_10
Type: TC
Location: 12000 - 12995 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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