Cluster: HRGMv2_2231_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_00973
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2231_39 | HRGMv2_2231_39_2 | 422 | 2416 | - | GH31_1 |
| NULL(UNKNOWN) | HRGMv2_2231_39 | HRGMv2_2231_39_3 | 2499 | 4568 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2231_39 | HRGMv2_2231_39_4 | 4571 | 5395 | - | 3.A.1.1.45 |
| TC | HRGMv2_2231_39 | HRGMv2_2231_39_5 | 5392 | 6315 | - | 3.A.1.1.45 |
| STP | HRGMv2_2231_39 | HRGMv2_2231_39_6 | 6346 | 7635 | - | SBP_bac_1 |
| TC | HRGMv2_2231_39 | HRGMv2_2231_39_7 | 7796 | 9607 | + | 8.A.59.2.1 |
Gene ID: HRGMv2_2231_39_2
Type: CAZyme
Location: 422 - 2416 (-)
Type: CAZyme
Location: 422 - 2416 (-)
Gene ID: HRGMv2_2231_39_3
Type:
Location: 2499 - 4568 (-)
Type:
Location: 2499 - 4568 (-)
Gene ID: HRGMv2_2231_39_4
Type: TC
Location: 4571 - 5395 (-)
Type: TC
Location: 4571 - 5395 (-)
Gene ID: HRGMv2_2231_39_5
Type: TC
Location: 5392 - 6315 (-)
Type: TC
Location: 5392 - 6315 (-)
Gene ID: HRGMv2_2231_39_6
Type: STP
Location: 6346 - 7635 (-)
Type: STP
Location: 6346 - 7635 (-)
Gene ID: HRGMv2_2231_39_7
Type: TC
Location: 7796 - 9607 (+)
Type: TC
Location: 7796 - 9607 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2231_39_2 | vegetarian > vegan | 1.01866 | 0.00566 |