Cluster: HRGMv2_2231_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_06110
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2231_28 | HRGMv2_2231_28_1 | 141 | 2387 | + | GH36 |
| pfam | HRGMv2_2231_28 | HRGMv2_2231_28_2 | 2461 | 3237 | + | TauE |
| TC | HRGMv2_2231_28 | HRGMv2_2231_28_3 | 3229 | 4005 | - | 2.A.5.5.2 |
| TC | HRGMv2_2231_28 | HRGMv2_2231_28_4 | 4124 | 5821 | - | 1.B.52.2.1 |
Gene ID: HRGMv2_2231_28_1
Type: CAZyme
Location: 141 - 2387 (+)
Type: CAZyme
Location: 141 - 2387 (+)
Gene ID: HRGMv2_2231_28_2
Type: pfam
Location: 2461 - 3237 (+)
Type: pfam
Location: 2461 - 3237 (+)
Gene ID: HRGMv2_2231_28_3
Type: TC
Location: 3229 - 4005 (-)
Type: TC
Location: 3229 - 4005 (-)
Gene ID: HRGMv2_2231_28_4
Type: TC
Location: 4124 - 5821 (-)
Type: TC
Location: 4124 - 5821 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.