Cluster: HRGMv2_2231_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_01867
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2231_21 | HRGMv2_2231_21_40 | 42691 | 44349 | + | 3.A.1.1.10 |
| TC | HRGMv2_2231_21 | HRGMv2_2231_21_41 | 44369 | 45286 | + | 3.A.1.1.10 |
| TC | HRGMv2_2231_21 | HRGMv2_2231_21_42 | 45280 | 46182 | + | 3.A.1.1.10 |
| NULL(UNKNOWN) | HRGMv2_2231_21 | HRGMv2_2231_21_43 | 46201 | 47487 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2231_21 | HRGMv2_2231_21_44 | 47506 | 48711 | + | GH109 |
Gene ID: HRGMv2_2231_21_40
Type: TC
Location: 42691 - 44349 (+)
Type: TC
Location: 42691 - 44349 (+)
Gene ID: HRGMv2_2231_21_41
Type: TC
Location: 44369 - 45286 (+)
Type: TC
Location: 44369 - 45286 (+)
Gene ID: HRGMv2_2231_21_42
Type: TC
Location: 45280 - 46182 (+)
Type: TC
Location: 45280 - 46182 (+)
Gene ID: HRGMv2_2231_21_43
Type:
Location: 46201 - 47487 (+)
Type:
Location: 46201 - 47487 (+)
Gene ID: HRGMv2_2231_21_44
Type: CAZyme
Location: 47506 - 48711 (+)
Type: CAZyme
Location: 47506 - 48711 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.