Cluster: HRGMv2_2231_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_02740
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2231_20 | HRGMv2_2231_20_39 | 38507 | 39658 | + | GH25 |
| TC | HRGMv2_2231_20 | HRGMv2_2231_20_40 | 39718 | 40284 | - | 3.A.1.26.9 |
| STP | HRGMv2_2231_20 | HRGMv2_2231_20_41 | 40673 | 40885 | + | FeoA |
| STP | HRGMv2_2231_20 | HRGMv2_2231_20_42 | 40915 | 41166 | + | FeoA |
| TC | HRGMv2_2231_20 | HRGMv2_2231_20_43 | 41234 | 43366 | + | 9.A.8.1.9 |
Gene ID: HRGMv2_2231_20_39
Type: CAZyme
Location: 38507 - 39658 (+)
Type: CAZyme
Location: 38507 - 39658 (+)
Gene ID: HRGMv2_2231_20_40
Type: TC
Location: 39718 - 40284 (-)
Type: TC
Location: 39718 - 40284 (-)
Gene ID: HRGMv2_2231_20_41
Type: STP
Location: 40673 - 40885 (+)
Type: STP
Location: 40673 - 40885 (+)
Gene ID: HRGMv2_2231_20_42
Type: STP
Location: 40915 - 41166 (+)
Type: STP
Location: 40915 - 41166 (+)
Gene ID: HRGMv2_2231_20_43
Type: TC
Location: 41234 - 43366 (+)
Type: TC
Location: 41234 - 43366 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.