Cluster: HRGMv2_2231_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_00327
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2231_18 | HRGMv2_2231_18_33 | 30034 | 30705 | + | 3.A.1.122.2 |
| TC | HRGMv2_2231_18 | HRGMv2_2231_18_34 | 30698 | 31900 | + | 3.A.1.122.2 |
| NULL(UNKNOWN) | HRGMv2_2231_18 | HRGMv2_2231_18_35 | 31950 | 32687 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_2231_18 | HRGMv2_2231_18_36 | 32764 | 33030 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2231_18 | HRGMv2_2231_18_37 | 33047 | 35809 | - | GT51 |
| pfam | HRGMv2_2231_18 | HRGMv2_2231_18_38 | 35977 | 36645 | + | UPF0029 | DUF1949 |
| TC | HRGMv2_2231_18 | HRGMv2_2231_18_39 | 36784 | 38115 | + | 1.A.26.1.2 |
Gene ID: HRGMv2_2231_18_33
Type: TC
Location: 30034 - 30705 (+)
Type: TC
Location: 30034 - 30705 (+)
Gene ID: HRGMv2_2231_18_34
Type: TC
Location: 30698 - 31900 (+)
Type: TC
Location: 30698 - 31900 (+)
Gene ID: HRGMv2_2231_18_35
Type:
Location: 31950 - 32687 (+)
Type:
Location: 31950 - 32687 (+)
Gene ID: HRGMv2_2231_18_36
Type:
Location: 32764 - 33030 (-)
Type:
Location: 32764 - 33030 (-)
Gene ID: HRGMv2_2231_18_37
Type: CAZyme
Location: 33047 - 35809 (-)
Type: CAZyme
Location: 33047 - 35809 (-)
Gene ID: HRGMv2_2231_18_38
Type: pfam
Location: 35977 - 36645 (+)
Type: pfam
Location: 35977 - 36645 (+)
Gene ID: HRGMv2_2231_18_39
Type: TC
Location: 36784 - 38115 (+)
Type: TC
Location: 36784 - 38115 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.