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Cluster: HRGMv2_2231_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2231_11 HRGMv2_2231_11_11 12244 13356 - GH25
pfam HRGMv2_2231_11 HRGMv2_2231_11_12 13540 14583 + ApbE
TC HRGMv2_2231_11 HRGMv2_2231_11_13 14621 15412 - 3.D.6.1.2
TC HRGMv2_2231_11 HRGMv2_2231_11_14 15443 16030 - 3.D.6.1.2
TC HRGMv2_2231_11 HRGMv2_2231_11_15 16031 16774 - 3.D.6.1.2
TC HRGMv2_2231_11 HRGMv2_2231_11_16 16767 17384 - 3.D.6.1.2
TC HRGMv2_2231_11 HRGMv2_2231_11_17 17381 18328 - 3.D.6.1.2
TC HRGMv2_2231_11 HRGMv2_2231_11_18 18330 19661 - 3.D.6.1.2
pfam HRGMv2_2231_11 HRGMv2_2231_11_19 19798 20901 + DNA_pol_B_exo1 | RNase_H_2
TC HRGMv2_2231_11 HRGMv2_2231_11_20 20997 23081 - 4.A.3.2.2
Gene ID: HRGMv2_2231_11_11
Type: CAZyme
Location: 12244 - 13356 (-)
Gene ID: HRGMv2_2231_11_12
Type: pfam
Location: 13540 - 14583 (+)
Gene ID: HRGMv2_2231_11_13
Type: TC
Location: 14621 - 15412 (-)
Gene ID: HRGMv2_2231_11_14
Type: TC
Location: 15443 - 16030 (-)
Gene ID: HRGMv2_2231_11_15
Type: TC
Location: 16031 - 16774 (-)
Gene ID: HRGMv2_2231_11_16
Type: TC
Location: 16767 - 17384 (-)
Gene ID: HRGMv2_2231_11_17
Type: TC
Location: 17381 - 18328 (-)
Gene ID: HRGMv2_2231_11_18
Type: TC
Location: 18330 - 19661 (-)
Gene ID: HRGMv2_2231_11_19
Type: pfam
Location: 19798 - 20901 (+)
Gene ID: HRGMv2_2231_11_20
Type: TC
Location: 20997 - 23081 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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