Cluster: HRGMv2_2231_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_00167
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2231_9 | HRGMv2_2231_9_97 | 89504 | 90397 | + | 3.A.1.1.10 |
| TC | HRGMv2_2231_9 | HRGMv2_2231_9_98 | 90420 | 91328 | + | 3.A.1.1.10 |
| TC | HRGMv2_2231_9 | HRGMv2_2231_9_99 | 91354 | 93030 | + | 3.A.1.1.9 |
| CAZyme | HRGMv2_2231_9 | HRGMv2_2231_9_100 | 93056 | 94522 | + | GH32 |
Gene ID: HRGMv2_2231_9_97
Type: TC
Location: 89504 - 90397 (+)
Type: TC
Location: 89504 - 90397 (+)
Gene ID: HRGMv2_2231_9_98
Type: TC
Location: 90420 - 91328 (+)
Type: TC
Location: 90420 - 91328 (+)
Gene ID: HRGMv2_2231_9_99
Type: TC
Location: 91354 - 93030 (+)
Type: TC
Location: 91354 - 93030 (+)
Gene ID: HRGMv2_2231_9_100
Type: CAZyme
Location: 93056 - 94522 (+)
Type: CAZyme
Location: 93056 - 94522 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.