Cluster: HRGMv2_2231_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_04836
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2231_9 | HRGMv2_2231_9_41 | 37546 | 39231 | - | GH13_31 |
| TF | HRGMv2_2231_9 | HRGMv2_2231_9_42 | 39456 | 41060 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2231_9 | HRGMv2_2231_9_43 | 41188 | 42837 | - | 3.A.1.2.3 |
| TC | HRGMv2_2231_9 | HRGMv2_2231_9_44 | 42856 | 44364 | - | 3.A.1.2.3 |
| pfam | HRGMv2_2231_9 | HRGMv2_2231_9_45 | 44457 | 45782 | - | Peripla_BP_4 | Peripla_BP_7 |
| TC | HRGMv2_2231_9 | HRGMv2_2231_9_46 | 46108 | 47826 | + | 9.B.33.1.1 |
Gene ID: HRGMv2_2231_9_41
Type: CAZyme
Location: 37546 - 39231 (-)
Type: CAZyme
Location: 37546 - 39231 (-)
Gene ID: HRGMv2_2231_9_42
Type: TF
Location: 39456 - 41060 (-)
Type: TF
Location: 39456 - 41060 (-)
Gene ID: HRGMv2_2231_9_43
Type: TC
Location: 41188 - 42837 (-)
Type: TC
Location: 41188 - 42837 (-)
Gene ID: HRGMv2_2231_9_44
Type: TC
Location: 42856 - 44364 (-)
Type: TC
Location: 42856 - 44364 (-)
Gene ID: HRGMv2_2231_9_45
Type: pfam
Location: 44457 - 45782 (-)
Type: pfam
Location: 44457 - 45782 (-)
Gene ID: HRGMv2_2231_9_46
Type: TC
Location: 46108 - 47826 (+)
Type: TC
Location: 46108 - 47826 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.