Cluster: HRGMv2_2231_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_00866
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2231_8 | HRGMv2_2231_8_45 | 45116 | 46423 | - | GH29 |
| TC | HRGMv2_2231_8 | HRGMv2_2231_8_46 | 46443 | 47288 | - | 3.A.1.1.47 |
| TC | HRGMv2_2231_8 | HRGMv2_2231_8_47 | 47307 | 48242 | - | 3.A.1.1.47 |
| TC | HRGMv2_2231_8 | HRGMv2_2231_8_48 | 48318 | 49682 | - | 3.A.1.1.47 |
| TC | HRGMv2_2231_8 | HRGMv2_2231_8_49 | 49905 | 51170 | - | 3.A.1.1.47 |
| TF | HRGMv2_2231_8 | HRGMv2_2231_8_50 | 51154 | 51906 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2231_8 | HRGMv2_2231_8_51 | 51912 | 53621 | - | 8.A.59.2.1 |
Gene ID: HRGMv2_2231_8_45
Type: CAZyme
Location: 45116 - 46423 (-)
Type: CAZyme
Location: 45116 - 46423 (-)
Gene ID: HRGMv2_2231_8_46
Type: TC
Location: 46443 - 47288 (-)
Type: TC
Location: 46443 - 47288 (-)
Gene ID: HRGMv2_2231_8_47
Type: TC
Location: 47307 - 48242 (-)
Type: TC
Location: 47307 - 48242 (-)
Gene ID: HRGMv2_2231_8_48
Type: TC
Location: 48318 - 49682 (-)
Type: TC
Location: 48318 - 49682 (-)
Gene ID: HRGMv2_2231_8_49
Type: TC
Location: 49905 - 51170 (-)
Type: TC
Location: 49905 - 51170 (-)
Gene ID: HRGMv2_2231_8_50
Type: TF
Location: 51154 - 51906 (-)
Type: TF
Location: 51154 - 51906 (-)
Gene ID: HRGMv2_2231_8_51
Type: TC
Location: 51912 - 53621 (-)
Type: TC
Location: 51912 - 53621 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.