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Cluster: HRGMv2_2231_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2231_7 HRGMv2_2231_7_68 86351 86692 + 2.A.7.33.5
NULL(UNKNOWN) HRGMv2_2231_7 HRGMv2_2231_7_69 86658 86936 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2231_7 HRGMv2_2231_7_70 87204 90368 + GH25
pfam HRGMv2_2231_7 HRGMv2_2231_7_71 90491 91273 + PHP
TC HRGMv2_2231_7 HRGMv2_2231_7_72 91278 93059 + 8.A.59.2.1
TF HRGMv2_2231_7 HRGMv2_2231_7_73 93034 93858 + HTH_AraC
TC HRGMv2_2231_7 HRGMv2_2231_7_74 93974 95662 + 3.A.1.1.9
TC HRGMv2_2231_7 HRGMv2_2231_7_75 95690 96607 + 3.A.1.1.9
TC HRGMv2_2231_7 HRGMv2_2231_7_76 96618 97505 + 3.A.1.1.9
Gene ID: HRGMv2_2231_7_68
Type: TC
Location: 86351 - 86692 (+)
Gene ID: HRGMv2_2231_7_69
Type:
Location: 86658 - 86936 (-)
Gene ID: HRGMv2_2231_7_70
Type: CAZyme
Location: 87204 - 90368 (+)
Gene ID: HRGMv2_2231_7_71
Type: pfam
Location: 90491 - 91273 (+)
Gene ID: HRGMv2_2231_7_72
Type: TC
Location: 91278 - 93059 (+)
Gene ID: HRGMv2_2231_7_73
Type: TF
Location: 93034 - 93858 (+)
Gene ID: HRGMv2_2231_7_74
Type: TC
Location: 93974 - 95662 (+)
Gene ID: HRGMv2_2231_7_75
Type: TC
Location: 95690 - 96607 (+)
Gene ID: HRGMv2_2231_7_76
Type: TC
Location: 96618 - 97505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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