Cluster: HRGMv2_2231_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2231
- CGC Family ID: CGCFAM_00706
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2231_5 | HRGMv2_2231_5_5 | 5785 | 7620 | + | GH13_11 |
| pfam | HRGMv2_2231_5 | HRGMv2_2231_5_6 | 7617 | 8162 | + | DUF5662 |
| TC | HRGMv2_2231_5 | HRGMv2_2231_5_7 | 8543 | 9607 | - | 3.A.1.11.7 |
| TC | HRGMv2_2231_5 | HRGMv2_2231_5_8 | 9621 | 10427 | - | 3.A.1.11.8 |
| TC | HRGMv2_2231_5 | HRGMv2_2231_5_9 | 10424 | 11248 | - | 3.A.1.11.8 |
| TC | HRGMv2_2231_5 | HRGMv2_2231_5_10 | 11241 | 12314 | - | 3.A.1.11.8 |
Gene ID: HRGMv2_2231_5_5
Type: CAZyme
Location: 5785 - 7620 (+)
Type: CAZyme
Location: 5785 - 7620 (+)
Gene ID: HRGMv2_2231_5_6
Type: pfam
Location: 7617 - 8162 (+)
Type: pfam
Location: 7617 - 8162 (+)
Gene ID: HRGMv2_2231_5_7
Type: TC
Location: 8543 - 9607 (-)
Type: TC
Location: 8543 - 9607 (-)
Gene ID: HRGMv2_2231_5_8
Type: TC
Location: 9621 - 10427 (-)
Type: TC
Location: 9621 - 10427 (-)
Gene ID: HRGMv2_2231_5_9
Type: TC
Location: 10424 - 11248 (-)
Type: TC
Location: 10424 - 11248 (-)
Gene ID: HRGMv2_2231_5_10
Type: TC
Location: 11241 - 12314 (-)
Type: TC
Location: 11241 - 12314 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
UMGS2037
Species
UMGS2037 sp934371505
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.